Try it on paper first. A hint, the key idea and the worked solution are here when you need them.
A single strand of DNA reads 5′-ATGCGTAC-3′. The molar masses of the nucleotide residues, each one a nucleotide monophosphate minus a molecule of water, are: A , C , G and T . A strand with a 5′ phosphate group and a 3′ hydroxyl group has a molar mass equal to the sum of its residues plus one water (). Find the molar mass of this strand, its percentage of G and C, and the molar mass of the duplex it forms with its partner strand.
In double-stranded DNA, A pairs with T and G pairs with C. So , and . An A-T pair has 2 hydrogen bonds and a G-C pair has 3. A strand of nucleotides has phosphodiester linkages. A chain of nucleotides has a molar mass equal to the sum of the nucleotide residues plus one water.
Have you tried it?
Work it out on paper first. It is fine to get stuck or make a mistake: that is how we learn. When you are ready, go through the solution one step at a time, and check each step against your own.
Plan. Count the bases, add their masses, and add one water.
Step 1. Counts. A, T, G and C each occur twice in ATGCGTAC.
Step 2. Residues. .
Step 3. Strand. Add one water: .
Step 4. GC content. G and C make 4 of the 8 bases, which is .
Step 5. Partner and duplex. The partner of the strand has T opposite each A, A opposite each T, C opposite each G and G opposite each C. It also has two of each base, so it has the same molar mass. The duplex is .
Answer: , and .
Check. The partner is 5′-GTACGCAT-3′, which has two of each base too.
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